markerFinder {MetaCyto} | R Documentation |
A function that finds markers in a flow frame object.
markerFinder(fcsFrame)
fcsFrame |
A flow frame object. |
If the antibody name is available, the antibody name will be returned, otherwise, the channel name will be returned.
Returns a vector of markers.
library(flowCore) files=system.file("extdata","SDY420/ResultFiles/CyTOF_result", package="MetaCyto") files=list.files(files,pattern="fcs$",full.names=TRUE)[1] fcs = read.FCS(files) markers = markerFinder(fcs)