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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ChIPexoQualExample")
In most cases, you don't need to download the package archive at all.
ChIPexoQualExample
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Example data for the ChIPexoQual package, which implements a quality control pipeline for ChIP-exo data
Bioconductor version: Release (3.5)
Data for the ChIPexoQual package, consisting of (3) chromosome 1 aligned reads from a ChIP-exo experiment for FoxA1 in mouse liver cell lines aligned to the mm9 genome.
Author: Rene Welch, Dongjun Chung, Sunduz Keles
Maintainer: Rene Welch <welch at stat.wisc.edu>
Citation (from within R,
enter citation("ChIPexoQualExample")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ChIPexoQualExample")
Documentation
| HTML | R Script | Vignette Title |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | ExperimentData, Genome |
| Version | 1.0.0 |
| License | GPL (>= 2) |
| Depends | R (>= 3.3) |
| Imports | |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | http://www.github.com/keleslab/ChIPexoQualExample |
| Depends On Me | |
| Imports Me | |
| Suggests Me | ChIPexoQual |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | ChIPexoQualExample_1.0.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/ChIPexoQualExample |
| Package Short Url | http://bioconductor.org/packages/ChIPexoQualExample/ |
| Package Downloads Report | Download Stats |
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