Detect tissue heterogeneity in expression profiles with gene sets


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Documentation for package ‘BioQC’ version 1.4.0

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absLog10p Absolute base-10 logarithm of p-values
entropy Shannon entropy and related concepts
entropyDiversity Shannon entropy and related concepts
entropySpecificity Shannon entropy and related concepts
filterPmat Filter rows of p-value matrix under the significance threshold
gini Calculate Gini Index of a numeric vector
readGmt Read in gene sets from a GMT file
sampleSpecialization Shannon entropy and related concepts
wmwTest Wilcoxon-Mann-Whitney rank sum test for high-throughput expression profiling data