To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("sevenbridges")

In most cases, you don't need to download the package archive at all.

sevenbridges

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see sevenbridges.

Seven Bridges Platform API Client and Common Workflow Language Tool Builder in R

Bioconductor version: 3.4

R client and utilities for Seven Bridges platform API, from Cancer Genomics Cloud to other Seven Bridges supported platforms.

Author: Nan Xiao [aut, cre], Dusan Randjelovic [aut], Emile Young [ctb], Tengfei Yin [aut], Seven Bridges Genomics [cph]

Maintainer: Nan Xiao <nan.xiao at sevenbridges.com>

Citation (from within R, enter citation("sevenbridges")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("sevenbridges")

HTML	R Script	Complete Guide for Seven Bridges API R Client
HTML	R Script	Creating Your Docker Container and Command Line Interface (with docopt)
HTML	R Script	Describe and Execute CWL Tools/Workflows in R
HTML	R Script	Find Data on CGC via Data Exploerer, SPARQL, and Datasets API
HTML	R Script	IDE Container: RStudio Server, Shiny Server, and More
HTML	R Script	Master Tutorial: Use R for Cancer Genomics Cloud
PDF		Reference Manual
Text		NEWS
Text		LICENSE

biocViews	DataImport, Software, ThirdPartyClient
Version	1.4.9
In Bioconductor since	BioC 3.3 (R-3.3) (1 year)
License	Apache License 2.0 \| file LICENSE
Depends	methods, utils, stats
Imports	httr, jsonlite, yaml, objectProperties, stringr, S4Vectors, docopt, curl, liftr, uuid, dplyr, shiny (>= 0.13), miniUI (>= 0.1.1), rstudioapi (>= 0.5)
LinkingTo
Suggests	knitr, rmarkdown, testthat, readr, clipr
SystemRequirements
Enhances
URL	https://www.sevenbridges.com https://sbg.github.io/sevenbridges-r/ https://github.com/sbg/sevenbridges-r
BugReports	https://github.com/sbg/sevenbridges-r/issues
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	sevenbridges_1.4.9.tar.gz
Windows Binary	sevenbridges_1.4.9.zip
Mac OS X 10.9 (Mavericks)	sevenbridges_1.4.9.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/sevenbridges/tree/release-3.4
Package Short Url	http://bioconductor.org/packages/sevenbridges/
Package Downloads Report	Download Stats

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