Calculates Mulcom test


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Documentation for package ‘Mulcom’ version 1.24.0

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Affy Affy Dataset
AffyIlmn cross mapping table
class:MULCOM Class MulCom
class:MULCOM_P Class MulCom Permutation
harmonicMean MulCom Harmonic Mean
Illumina Illumina Dataset
Ilmn Ilmn Dataset
limmaAffySymbols significant gene list with limma in Affymetrix
limmaIlmnSymbols significant gene list with limma in Illumina
mulCalc MulCom Calculation
mulCAND Identify the Mulcom candidate feature selection
MULCOM Class MulCom
MULCOM-class Class MulCom
mulcomGeneListIlmn significant gene list with limma in Illumina
MULCOM_P Class MulCom Permutation
MULCOM_P-class Class MulCom Permutation
mulDELTA MulCom Delta
mulDiff MulCom Test Differential analysis
mulFSG MulCom False Significant Genes
mulIndex Mulcom Index for Monte Carlo Simlation
mulInt generates a consensus matrix from list of genes
mulMSE MulCom Mean Square Error
mulOpt MulCom optimization
mulOptPars MulCom Parameter Optimization
mulOptPlot MulCom optimization Plot
mulParOpt MulCom Parameters Optimization
mulPerm MulCom Permutation
mulPermC MulCom Permutation
mulScores MulCom Score Calculation
mulSSE MulCom Sum of Square Error
samAffySymbols significant gene list with SAM in Affymetrix
samIlmnSymbols significant gene list with SAM in Illumina
samOptPars sam Parameter Optimization