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highthroughputassays

Using Bioconductor with High Throughput Assays

Bioconductor version: 3.24 · Package version: 1.37.0

The workflow illustrates use of the flow cytometry packages to load, transform and visualize the flow data and gate certain populations in the dataset. The workflow loads the `flowCore`, `flowStats` and `flowWorkspace` packages and its dependencies. It loads the ITN data with 15 samples, each of which includes, in addition to FSC and SSC, 5 fluorescence channels: CD3, CD4, CD8, CD69 and HLADR.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("highthroughputassays")

Details

MaintainerBioconductor Package Maintainer <maintainer@bioconductor.org>
AuthorBioconductor Package Maintainer [aut, cre]
LicenseArtistic-2.0
URLhttps://www.bioconductor.org/help/workflows/highthroughputassays/
Downloads rank96
Source branchdevel
biocViewsImmunoOncologyWorkflow, ProteomicsWorkflow, Workflow

Download

Follow the installation instructions to use this package in your R session.

Source packagehighthroughputassays_1.37.0.tar.gz
Dependencies

Depends: R (>= 3.3.0), flowCore, flowStats, flowWorkspace

Suggests: knitr, rmarkdown, BiocStyle