rcellminerData
rcellminerData: Molecular Profiles and Drug Response for the NCI-60 Cell Lines
Bioconductor version: 3.24 · Package version: 2.35.0
The NCI-60 cancer cell line panel has been used over the course of several decades as an anti-cancer drug screen. This panel was developed as part of the Developmental Therapeutics Program (DTP, http://dtp.nci.nih.gov/) of the U.S. National Cancer Institute (NCI). Thousands of compounds have been tested on the NCI-60, which have been extensively characterized by many platforms for gene and protein expression, copy number, mutation, and others (Reinhold, et al., 2012). The purpose of the CellMiner project (http://discover.nci.nih.gov/ cellminer) has been to integrate data from multiple platforms used to analyze the NCI-60 and to provide a powerful suite of tools for exploration of NCI-60 data.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("rcellminerData") Details
| Maintainer | Augustin Luna <lunaa@cbio.mskcc.org>, Vinodh Rajapakse <vinodh.rajapakse@nih.gov>, Fathi Elloumi <fathi.elloumi@nih.gov> |
| Author | Augustin Luna, Vinodh Rajapakse, Fabricio Sousa |
| License | LGPL-3 + file LICENSE |
| Downloads rank | 244 |
| Source branch | devel |
| biocViews | CancerData, CopyNumberVariationData, ExperimentData, ExpressionData, MicroarrayData, NCI, SNPData, miRNAData |
Download
Follow the installation instructions to use this package in your R session.
| Source package | rcellminerData_2.35.0.tar.gz |
Dependencies
Depends: R (>= 3.5.0), Biobase
Suggests: knitr, testthat, BiocStyle, rcellminer, rmarkdown
Reverse dependencies
Depends On Me (1): rcellminer