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minfiData

Example data for the Illumina Methylation 450k array

Bioconductor version: 3.24 · Package version: 0.59.0

Data from 6 samples across 2 groups from 450k methylation arrays.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("minfiData")

Details

MaintainerKasper Daniel Hansen <kasperdanielhansen@gmail.com>
AuthorKasper Daniel Hansen, Martin Aryee, Winston Timp
LicenseArtistic-2.0
Downloads rank687
Source branchdevel
biocViewsExperimentData, Homo_sapiens_Data, MethylationArrayData, MicroarrayData

Download

Follow the installation instructions to use this package in your R session.

Source packageminfiData_0.59.0.tar.gz
Dependencies

Depends: R (>= 3.5.0), minfi (>= 1.21.2), IlluminaHumanMethylation450kmanifest, IlluminaHumanMethylation450kanno.ilmn12.hg19

Reverse dependencies

Depends On Me (1): methylationArrayAnalysis

Suggests Me (19): bigmelon, conumee, CopyNeutralIMA, dnaEPICO, ENmix, funtooNorm, Harman, mCSEA, MEAL, MethylAid, MethylAidData, minfi, missMethyl, MultiDataSet, recountmethylation, regionalpcs, shinyepico, shinyMethyl, skewr