RcisTarget.hg19.motifDBs.cisbpOnly.500bp
RcisTarget motif databases for human (hg19) - Subset of 4.6k motifs
Bioconductor version: 3.24 · Package version: 1.33.0
RcisTarget databases: Gene-based motif rankings and annotation to transcription factors. This package contains a subset of 4.6k motifs (cisbp motifs), scored only within 500bp upstream and the TSS. See RcisTarget tutorial to download the full databases, containing 20k motifs and search space up to 10kbp around the TSS.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("RcisTarget.hg19.motifDBs.cisbpOnly.500bp")Details
| Maintainer | Sara Aibar <sara.aibar@kuleuven.vib.be> |
| Author | Sara Aibar, Gert Hulselmans, Stein Aerts. Laboratory of Computational Biology, KU Leuven Center for Human Genetics. Leuven, Belgium. |
| License | GPL-3 |
| URL | http://scenic.aertslab.org |
| Downloads rank | 169 |
| Source branch | devel |
| biocViews | ExperimentData, Homo_sapiens_Data |
Download
Follow the installation instructions to use this package in your R session.
| Source package | RcisTarget.hg19.motifDBs.cisbpOnly.500bp_1.33.0.tar.gz |