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FDb.UCSC.snp135common.hg19

UCSC common SNPs track for dbSNP build 135

Bioconductor version: 3.24 · Package version: 1.0.0

makeFeatureDbFromUCSC cannot cope with this track, hence a package

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("FDb.UCSC.snp135common.hg19")

Details

MaintainerTim Triche, Jr. <tim.triche@gmail.com>
AuthorTim Triche, Jr.
LicenseArtistic-2.0
Downloads rank109
Source branchdevel
biocViewsAnnotationData, Homo_sapiens

Download

Follow the installation instructions to use this package in your R session.

Source packageFDb.UCSC.snp135common.hg19_1.0.0.tar.gz
Dependencies

Depends: GenomicFeatures (>= 1.7.22)

Imports: GenomicFeatures, AnnotationDbi

Suggests: BSgenome.Hsapiens.UCSC.hg19, SNPlocs.Hsapiens.dbSNP.20111119

Reverse dependencies

Suggests Me (1): FDb.InfiniumMethylation.hg19