EuPathDB
Provides access to pathogen annotation resources available on EuPathDB databases
Bioconductor version: 3.24 · Package version: 1.0.1
Brings together annotation resources from the various EuPathDB databases (PlasmoDB, ToxoDB, TriTrypDB, etc.) and makes them available in R using the AnnotationHub framework.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("EuPathDB")Details
| Maintainer | Keith Hughitt <keith.hughitt@gmail.com> |
| Author | Keith Hughitt [aut, cre] |
| License | Artistic-2.0 |
| URL | https://github.com/khughitt/EuPathDB |
| Bug Reports | https://github.com/khughitt/EuPathDB/issues |
| Downloads rank | 107 |
| Source branch | devel |
| biocViews | AnnotationData, AnnotationHub, DataImport, EuPathDB |
Download
Follow the installation instructions to use this package in your R session.
| Source package | EuPathDB_1.0.1.tar.gz |
Dependencies
Depends: R (>= 3.5), Biobase, GenomicRanges, GenomeInfoDbData, AnnotationHub (>= 2.13.8)
Imports: AnnotationHubData, Biostrings, BiocManager, utils