4779926c3e60558c1291a0ee9dd63ac7 *DESCRIPTION
1def4b1ecd0f9e6e845ee2567acfbee3 *NAMESPACE
eb40c1b9f7b9af22340d877350f5a133 *NEWS
6375223208ca9bfd4c06a2ef31f66d3c *R/DelegatingGenomicRanges-class.R
90ffbed66128a0a034ad80995867077c *R/GNCList-class.R
4d37e11f8e566cc75d7cfd80bc63f8aa *R/GPos-class.R
743e5a6a51b56efc04cd42d68199e0ec *R/GRanges-class.R
8a15263688e0722b94048daf738a10fe *R/GRangesFactor-class.R
b851dd1a1604fda4c89d357c9d672269 *R/GRangesList-class.R
8280b7404d3cc2fb053abfc1685a89fd *R/GenomicRanges-class.R
ac0dda84eb932377239e3ff4a5ebb260 *R/GenomicRanges-comparison.R
a379bec8bd8718566fb34d1a171a1fac *R/GenomicRangesList-class.R
a1d998c726a3868f64ae29abcb4eef10 *R/RangedData-methods.R
04dc4e64b2ab9ae41efecbe1b4cf2ade *R/absoluteRanges.R
7c787035017ff973b741997f904749cb *R/constraint.R
25d11f8d0442e051fbdd32cfad92356e *R/coverage-methods.R
2cd32e914ef29f7cb3a4ddca801e3c38 *R/findOverlaps-methods.R
dc14a22382bfc9f3fe2a4733af9bda77 *R/genomic-range-squeezers.R
75532d9e278aadb977f835ea8772f40d *R/genomicvars.R
fd17ca90b4bfee07cd21c84f93d934ea *R/inter-range-methods.R
9bab33394d6b825832c7421502fe411d *R/intra-range-methods.R
65942682bc30a5b5fb5855e64985e8ba *R/makeGRangesFromDataFrame.R
19a5e4c0b4f6295b442476728ae71760 *R/makeGRangesListFromDataFrame.R
37e6f6e1dc0140e62a03ce5c47ba0438 *R/nearest-methods.R
a143db88b9ee12fe5ddeb23be710cd94 *R/normarg-utils.R
86c79d66ef5738e5cf893bb700e0ed16 *R/phicoef.R
3314273eda9e62009fde5dac7795be31 *R/setops-methods.R
10c91f3b87f61c6119bbb7ad960953df *R/strand-utils.R
4ea3faa146979328f40a387b94224109 *R/subtract-methods.R
a5b3a8ac946a9c8dc75c612a4730361c *R/tile-methods.R
a760054bcf8ffcfab18abd39c8c5b63b *R/tileGenome.R
ce31dd791777af21abc92a62b6b0117c *R/utils.R
b04a3993aaf836139127a5c8acf2796d *R/zzz.R
e992c05d27dea049a69b46530b251279 *README.md
aa9874eabab71187cab173cae4d6d41f *build/vignette.rds
bcb46671f9de67f4c98c54cd2fb7b0a6 *inst/CITATION
6ecd0bee276e2b7db68a6dc1fa08b033 *inst/doc/ExtendingGenomicRanges.R
ddd793d4c363f1c08bdb5e049998796e *inst/doc/ExtendingGenomicRanges.Rnw
3631fc318a4524a9e9b4ecfd66e7ca35 *inst/doc/ExtendingGenomicRanges.pdf
c321c4c23fcf861c87bda1c576a31b8f *inst/doc/GRanges_and_GRangesList_slides.R
3377fbd9c5a26308da502d62c886e8cc *inst/doc/GRanges_and_GRangesList_slides.Rnw
65913192583b946ded4aa8af4afb30b0 *inst/doc/GRanges_and_GRangesList_slides.pdf
a3dcc6b72f1453572740354b9ff5778a *inst/doc/GenomicRangesHOWTOs.R
e82ded83f9fcc08294c6542f519b48c6 *inst/doc/GenomicRangesHOWTOs.Rnw
700c22713f11198a8fc80609aaab1c99 *inst/doc/GenomicRangesHOWTOs.pdf
48b57167b3bdc6185674e2894f80910a *inst/doc/GenomicRangesIntroduction.R
cd77d6eda97bdfa8dca8d07822c6bea0 *inst/doc/GenomicRangesIntroduction.Rmd
0d49de48cc462d5392d02fdfda264e12 *inst/doc/GenomicRangesIntroduction.html
90e24b5eb65a4eee256944a22e08f4f8 *inst/doc/Ten_things_slides.R
6e902d1034e40034e45747aa8769df48 *inst/doc/Ten_things_slides.Rnw
ee7bf350e173a1f55f3cc5dcf2b41cb8 *inst/doc/Ten_things_slides.pdf
ffcc2b8da187a7833f24c66473b4e153 *inst/extdata/feature_frags.txt
22bba3a217f433b8fe3ade26ba60c33a *inst/scripts/timing_overlaps.R
a595eb710d972096fe1a28e78d673e9c *inst/unitTests/test_GNCList-class.R
373f6ab78304da168aa320e4a856fd1a *inst/unitTests/test_GRanges-class.R
5dcfdde130195f891312c235bad5d66f *inst/unitTests/test_GRangesList-class.R
37b3d11399d977c95ebe3a5918042a97 *inst/unitTests/test_GenomicRanges-comparison.R
7f57006b67ef17deaedcfa41e7300585 *inst/unitTests/test_coverage-methods.R
968e130ed5e4e51a5d76f7bb9428c2be *inst/unitTests/test_findOverlaps-methods.R
70175c7aab99e8fa75bb37b66bfc5091 *inst/unitTests/test_inter-range-methods.R
6d48f9449e4dbf302efee5838e4c6a36 *inst/unitTests/test_intra-range-methods.R
e67bb491a9576ced3a4835ee3019d68f *inst/unitTests/test_makeGRangesFromDataFrame.R
f3ab173d217d739b6fe31a5eb1c2c133 *inst/unitTests/test_makeGRangesListFromDataFrame.R
3d86d2b163908a1ac6a2e5100282916b *inst/unitTests/test_nearest-methods.R
60637ee16badd34b152388d84644e3ba *inst/unitTests/test_precede_follow.R
c0d8d31b457c0497628355410a51d797 *inst/unitTests/test_setops-methods.R
ec94d6a0eec74d36df70a612a3c70626 *man/DelegatingGenomicRanges-class.Rd
ca2160ac5cd812c25d9a475ad2494b4b *man/GNCList-class.Rd
0ce52799998e2cf224e96556a2c02093 *man/GPos-class.Rd
e9596d999ec91e3695ac36d4cf2f2a36 *man/GRanges-class.Rd
e44c92186497d80b0ad7fe0cfd69da0f *man/GRangesFactor-class.Rd
08a92f8164983847284e32a0aa4d497b *man/GRangesList-class.Rd
4701052b83447dee2e72dd777b17cdaf *man/GenomicRanges-comparison.Rd
e0e5b7e05e3ffcc40713d4d595551bae *man/GenomicRangesList-class.Rd
1a3d01026fdddedbb54df0c397696095 *man/absoluteRanges.Rd
192b7d9c1c3ce4cb553eb5337f4e1fd5 *man/constraint.Rd
b9c39a173318a613ed2198683a3cc062 *man/coverage-methods.Rd
f194bf173cf2da290368ec95d20cc180 *man/findOverlaps-methods.Rd
669fb886ce9d880721bd455ca1621e65 *man/genomic-range-squeezers.Rd
19f32de7902e2f328a41013db75cf6ff *man/genomicvars.Rd
11b616fef2db860d25fc6d5aea068be6 *man/inter-range-methods.Rd
56eb179baa3d05dc5122384dd23c5482 *man/intra-range-methods.Rd
fa638a66d3e61cf2e6fd097025f7c49a *man/makeGRangesFromDataFrame.Rd
264721ca0166554a8b3248f81186c13a *man/makeGRangesListFromDataFrame.Rd
6317fa5e805e707e99936b70ecae7f4a *man/nearest-methods.Rd
ebb28b73ed93b90b0b6294ca99e6c22d *man/phicoef.Rd
2222be7a21d3d4633fc1c57217bfdd88 *man/setops-methods.Rd
f25ece52fdd888adbacede9019fb4591 *man/strand-utils.Rd
ee2b3de43690040d62639e76213489af *man/subtract-methods.Rd
1f7dd419d000eac353f78efef2b2befd *man/tile-methods.Rd
00537602075c1cb1f78124fb20896269 *man/tileGenome.Rd
474f7d98652de4a66db7b6cd6e86b46a *tests/run_unitTests.R
ddd793d4c363f1c08bdb5e049998796e *vignettes/ExtendingGenomicRanges.Rnw
3377fbd9c5a26308da502d62c886e8cc *vignettes/GRanges_and_GRangesList_slides.Rnw
9149782486b45d671e5673a1d43f8bbe *vignettes/GenomicRanges.bib
e82ded83f9fcc08294c6542f519b48c6 *vignettes/GenomicRangesHOWTOs.Rnw
cd77d6eda97bdfa8dca8d07822c6bea0 *vignettes/GenomicRangesIntroduction.Rmd
6e902d1034e40034e45747aa8769df48 *vignettes/Ten_things_slides.Rnw
f75b3f89df673d4de7bb283122873fef *vignettes/slides.sty
