abe08119268d06433177c48fe933bacd *DESCRIPTION
a3047606171cf8718394d54d2123d718 *NAMESPACE
9b663c57a1fa49b5acc26471fe157dfd *NEWS
2eae798e63e46032fd3a1b5f217b8b9b *R/AllClasses.R
bc8ffc70a84d1ca573e0e73bfc3bbbaa *R/AllGenerics.R
1766f5d47c9976a7d6c7154d6654e969 *R/GSVA-package.R
59574ae6e07d16e21f7b02a200a68ac6 *R/GSVA-pkg-defunct.R
406acb4b1ccca7e8e51641fd11da924e *R/GSVA-pkg-deprecated.R
d75042abc0359efb3c405ddc9cf1aa0a *R/GsvaMethodParam.R
f46e9999a08e0f5c595a6239e3db613f *R/average.R
f67f44b641e6dcb46406cad2e6e8030f *R/block_processing.R
dbe8035636d9a23637a6ddd81d4ea07b *R/genesets.R
6176264f82cb9446dada6cfb04e58e0d *R/gsva-global.R
dc28f890999b4d0ec788021239c82e40 *R/gsva-serialization.R
dfbab94b04c58d62325fe1d364e1ca21 *R/gsva.R
830c1955a2df45376961b073bcfed978 *R/map-reduce.R
b9dc820b43f9202894fb997cad429d32 *R/methods-ShinyApp.R
4d5f01aece579197b2bf35e37bf4aeb2 *R/plage.R
e22b2b84c5750551093f48cf58a320aa *R/spatial.R
17d84556c225ed3d84a32bd841403d4c *R/ssgsea.R
e0381ed530e2afaba127bddc32b9514e *R/utils.R
950b23acede0f20a890cb96a530461df *R/zscore.R
9c6efd7ddf2d97709f75552290099051 *R/zzz.R
37a7cdb041349afae7062bd64f253e21 *README.md
21c9401b8c07f38d762ade4612fc4ffe *build/partial.rdb
0766d75fac2a2a5ef1b19f8046b2e35b *build/vignette.rds
453d5f90bd6225b9bbf8fa9b9dd1e516 *cleanup
f1b7a918db657cba60304eb978b2450f *inst/CITATION
482c7bfa6e0cdbe02ffc00a6e33e1082 *inst/doc/GSVA.R
3a63b0e93ad22b4240e9eff12e0d3bc8 *inst/doc/GSVA.Rmd
71d8dfee8037495d48b40a954ce9b7a5 *inst/doc/GSVA.html
1accf1d1fdb55196399759882f8f1eeb *inst/doc/GSVA_HPC.R
d5117c50eeb3256b5d8b2fda85181657 *inst/doc/GSVA_HPC.Rmd
20f29e557e0cb5a148102b89e0d1df8d *inst/doc/GSVA_HPC.html
cf268f3b3b63a7628d7256ee50b39825 *inst/doc/GSVA_proteomics.R
c2253258ccb3b55dac193f26baecd59c *inst/doc/GSVA_proteomics.Rmd
44f16b5d88599458bee1d5df59db4461 *inst/doc/GSVA_proteomics.html
b089bd9fe3825bc13ff40fe16b4adea2 *inst/doc/GSVA_scRNAseq.R
abae20cc4e79db5e20f4d25e71a13d02 *inst/doc/GSVA_scRNAseq.Rmd
02295f9d206922d1b5ec348eaeb5a169 *inst/doc/GSVA_scRNAseq.html
5df5af5a6e1b846076db5d0b9c09856e *inst/doc/GSVA_spRNAseq.R
a45d603fe8a312a8ccac317b7e6ab04a *inst/doc/GSVA_spRNAseq.Rmd
ccbc0c7a0fa17d45f7c593fd790fb050 *inst/doc/GSVA_spRNAseq.html
bf968c2f1b5abd82360ced0ad33aae9e *inst/shinyApp/argumentsDataModule.R
25e2b694159c4e7d07f774614d9a3c58 *inst/shinyApp/closeModule.R
dc214dc088b1cd01628804b5296afb06 *inst/shinyApp/downloadModule.R
9cdb81086c4211775369cd3474d469e8 *inst/shinyApp/geneSetsModule.R
2c65b8e76c0322d7ed8ee293f2c898ec *inst/shinyApp/global.R
864045a809dcb3b5279972f874e20318 *inst/shinyApp/matrixModule.R
15da683e3de9cbf03c45be58a0de0d41 *inst/shinyApp/modalGSVAModule.R
d767155a0a53077a837552b5a9537ce8 *inst/shinyApp/plot1_Module.R
56a93a0297bd15075a35e940e6718571 *inst/shinyApp/plot2_Module.R
7fb0745614ce1f6818ae24101df1f571 *inst/shinyApp/plot3_Module.R
b651b3e5eb4ace75f5358a3d900c8057 *inst/shinyApp/server.R
bed624bd4a37319dce3c5d3351299803 *inst/shinyApp/ui.R
c6fd28f6180768396f84bf00f43a644f *inst/shinyApp/www/GSVA.png
871bcb8b39094743ba2792a9e8f0017c *inst/shinyApp/www/style.css
35f388aeb7a7b083ae73a130bc1b88cd *inst/unitTests/test_avgCcode.R
bb9b2559d3237097e95c94e51143f237 *inst/unitTests/test_genesets.R
9531a3f536a3709466267a35ce884e2c *inst/unitTests/test_gsvaCcode.R
8063132ed9c67887be20a31d34bdd148 *inst/unitTests/test_gsvaColRanks.R
3359cc4441cc389d5f6a64461deaa8d8 *inst/unitTests/test_gsvaRowNorm.R
c1d25f8fd28bd18c25145b352e3d0ca7 *inst/unitTests/test_inputdatacontainers.R
d911d2e67ff992c8d1cd385a0c1a95c4 *inst/unitTests/test_mainAPI.R
74c4835479c3486b02eb1f93bff60946 *inst/unitTests/test_mapReduce.R
276c31eb65b1e99f46c0776499489967 *inst/unitTests/test_navalues.R
bf3b89f3e8c80127ce79241fdbd86e96 *inst/unitTests/test_ondisk.R
03f7475515f0ff131bc2a91a596f50e9 *inst/unitTests/test_parallel.R
e1353a33259c9cbd3c25604466b93c74 *inst/unitTests/test_params.R
d068715396d81c512bb4acc7e7423c52 *inst/unitTests/test_serialization.R
94258044d7257d2019ab0397e424eb29 *inst/unitTests/test_sparse.R
e117426964b63ffb79124ed737fdf8e7 *inst/unitTests/test_spatial.R
9775e961ead52fbedfcc2aa117c2f888 *inst/unitTests/test_ssgsea.R
dccd81e67deece23e396e51881156eb5 *man/GSVA-pkg-defunct.Rd
374d4e6a4154767c8d651b4bb1c9f5e0 *man/GSVA-pkg-deprecated.Rd
1bd1563c5d1926edbe4f769720afeee9 *man/GsvaExprData-class.Rd
92ea07497bde8581dfd1b4100ae90377 *man/GsvaGeneSets-class.Rd
8a6305a35daec14538fba44a48e94a04 *man/GsvaMethodParam-class.Rd
3181339fb6855ae0ef5a3f2eb795ebfb *man/avgParam-class.Rd
f0b589edea0ec231ac4ce63263707a7f *man/computeGeneSetsOverlap.Rd
68ae87f81564dbddbf1e69b5999a8d65 *man/deduplicateGeneSets.Rd
7e46d890bd243147c0b792340742cde2 *man/filterGeneSets.Rd
80f333be69a199a08a8c6557af4d76a8 *man/geneIdsToGeneSetCollection.Rd
5f7e70b3ba93095134f4aa8b679d51f6 *man/geneSets.Rd
41e469a1407cc5db20e07213f87241cd *man/gsva-serialization.Rd
1a8b80a8670beb479566b38648983d81 *man/gsva.Rd
6ce181dc644dc0530ac154ef6b650fb5 *man/gsvaAnnotation.Rd
9592fe0587f95ae4b65ee346af4e7dc1 *man/gsvaEnrichment.Rd
b57a7eda54f133ac60967e0f66277bd8 *man/gsvaParam-class.Rd
57551e8afd8ad5d910f8081f8f7be386 *man/gsvaRanks.Rd
e16143e4afa84c18f4d96e25091f8c69 *man/guessGeneIdType.Rd
c3d8987b5e4eaf2530fb956cd80e4b0a *man/igsva.Rd
5705c1375355a3c75bc877b72e0c3441 *man/map-reduce.Rd
da4c7cd2390e12c8800058dd1a6b44e2 *man/plageParam-class.Rd
80f36344827c81405833759736906271 *man/readGMT.Rd
2b128356de2eeb9acc22aae5d87c13f1 *man/spatCor.Rd
5c1af4db557f90782ba22b7a49e77402 *man/ssgseaParam-class.Rd
3935bbefceb0d3c91cbd970d1c40dec3 *man/zscoreParam-class.Rd
1b88e26b23df1651f9a8c70d2d574ebb *src/average.c
cf5f4e5fd2e312c6121d543b6662a05f *src/ecdfvals.c
a2eaa6dbecb734ee0452daa6a1ac5732 *src/kcdfvals.c
c090d834965cac8eeae3c320fe681f6b *src/kernel_estimation.c
cade63672964fd70de43d42942cdf735 *src/ks_test.c
1235a4cdf49b96449104868d17ed6b51 *src/register_cmethods.c
2b9a63035e8455c379929d64261c3f52 *src/row_rngs_nzrngs.c
f6f0debb5e82610bef40f9c7528137d0 *src/utils.c
f2310c7773e0506a7998fe8de54969ac *tests/runTests.R
0f0b2b311b69698b52532c4cbf123b15 *tests/test_gsva_newapi.R
8c29672b60d2f44b17bb143e0be9ed20 *tests/test_gsva_newapi.Rout.save
1acc9a45221e1755a3561b5e56b2495e *tests/test_plage_newapi.R
db4ed62a3c7f6597d5de8cd082b8f654 *tests/test_plage_newapi.Rout.save
f9e8c5538f10663ad3b18cfbc7055b71 *tests/test_ssgsea_newapi.R
19da3a1db67ab043c5ffa5f8ba84e2b0 *tests/test_ssgsea_newapi.Rout.save
558b265dc798838662e1e214a3155035 *tests/test_zscore_newapi.R
17ef6b670e8c0334f9c456df21991b7a *tests/test_zscore_newapi.Rout.save
3a63b0e93ad22b4240e9eff12e0d3bc8 *vignettes/GSVA.Rmd
667f139cf1984cdbff4601fe930ca9ce *vignettes/GSVA.bib
d5117c50eeb3256b5d8b2fda85181657 *vignettes/GSVA_HPC.Rmd
c2253258ccb3b55dac193f26baecd59c *vignettes/GSVA_proteomics.Rmd
abae20cc4e79db5e20f4d25e71a13d02 *vignettes/GSVA_scRNAseq.Rmd
a45d603fe8a312a8ccac317b7e6ab04a *vignettes/GSVA_spRNAseq.Rmd
7f8eb02c3a715cc27c9e6954bd8d3b38 *vignettes/methods.png
a407c8f86caaae0ecbe41d26a3e88319 *vignettes/webapp1.png
93e0a4fffed5119c01f62a4751d13f03 *vignettes/webapp2.png
