Changes in version 0.99.2 (2026-06-12) --------------------------------------- * Address Bioconductor reviewer comments: fix DOI formatting, update Date field, reword Description for clarity, and fix NEWS versioning. Changes in version 0.99.1 (2026-02-13) --------------------------------------- * Added BiocParallel support: parallelCGR() now accepts a BPPARAM argument (default BiocParallel::bpparam()) replacing the num_cores integer parameter. * Removed cgat(); all internal calls now use cgat_local() which avoids global-environment dependency. * Renamed fastafile_new() to filter_N() for clarity. * Removed .RData, .Rhistory, and INSTALL artefacts from the repository. Changes in version 0.99.0 (2025-11-01) --------------------------------------- * Initial Bioconductor submission. * Added parallelCGR(), calculateDistanceMatrix(), saveMegaDistance(), savePhylipDistance(), cgrplot(), and from_DNAStringSet().