sights

Statistics and dIagnostic Graphs for HTS

Bioconductor version: 3.24 · Package version: 1.39.0

SIGHTS is a suite of normalization methods, statistical tests, and diagnostic graphical tools for high throughput screening (HTS) assays. HTS assays use microtitre plates to screen large libraries of compounds for their biological, chemical, or biochemical activity.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("sights")

Details

Maintainer	Elika Garg <elika.garg@mail.mcgill.ca>
Author	Elika Garg [aut, cre], Carl Murie [aut], Heydar Ensha [ctb], Robert Nadon [aut]
License	GPL-3 \| file LICENSE
URL	https://eg-r.github.io/sights/
Bug Reports	https://github.com/eg-r/sights/issues
Downloads rank	437
Source branch	devel
biocViews	BatchEffect, CellBasedAssays, ImmunoOncology, MicrotitrePlateAssay, MultipleComparison, Normalization, Preprocessing, QualityControl, Software, Visualization

Documentation

Using SIGHTS R-package

Download

Follow the installation instructions to use this package in your R session.

Source package	sights_1.39.0.tar.gz
Windows binary (x86_64)	sights_1.39.0.zip
macOS binary (arm64)	sights_1.39.0.tgz
macOS binary (x86_64)	sights_1.39.0.tgz

Dependencies

Depends: R (>= 3.3)

Imports: MASS (>= 7.3), qvalue (>= 2.2), ggplot2 (>= 2.0), reshape2 (>= 1.4), lattice (>= 0.2), stats (>= 3.3)

Suggests: testthat, knitr, rmarkdown, ggthemes, gridExtra, xlsx