rnaseqcomp
Benchmarks for RNA-seq Quantification Pipelines
Bioconductor version: 3.24 · Package version: 1.43.0
Several quantitative and visualized benchmarks for RNA-seq quantification pipelines. Two-condition quantifications for genes, transcripts, junctions or exons by each pipeline with necessary meta information should be organized into numeric matrices in order to proceed the evaluation.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("rnaseqcomp")Details
| Maintainer | Mingxiang Teng <tengmx@gmail.com> |
| Author | Mingxiang Teng and Rafael A. Irizarry |
| License | GPL-3 |
| URL | https://github.com/tengmx/rnaseqcomp |
| Downloads rank | 491 |
| Source branch | devel |
| biocViews | QualityControl, RNASeq, Software, Visualization |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | rnaseqcomp_1.43.0.tar.gz |
| Windows binary (x86_64) | rnaseqcomp_1.43.0.zip |
| macOS binary (arm64) | rnaseqcomp_1.43.0.tgz |
| macOS binary (x86_64) | rnaseqcomp_1.43.0.tgz |