mobileRNA

mobileRNA: an integrative, automated tool for accurate identification of mobile RNA molecules based on multiple genome mapping.

Bioconductor version: 3.24 · Package version: 1.9.3

Genomic analysis can be utilised to identify differences between RNA populations in two conditions, both in production and abundance. This includes the identification of RNAs produced by multiple genomes within a biological system. For example, RNA produced by pathogens within a host or mobile RNAs in plant graft systems. The mobileRNA package provides methods to pre-process, analyse and visualise the sRNA and mRNA populations based on the premise of mapping reads to all genotypes at the same time.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("mobileRNA")