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flowStats

Statistical methods for the analysis of flow cytometry data

Bioconductor version: 3.24 · Package version: 4.25.0

Methods and functionality to analyse flow data that is beyond the basic infrastructure provided by the flowCore package.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("flowStats")

Details

MaintainerGreg Finak <greg@ozette.com>, Mike Jiang <mike@ozette.com>
AuthorFlorian Hahne, Nishant Gopalakrishnan, Alireza Hadj Khodabakhshi, Chao-Jen Wong, Kyongryun Lee
LicenseArtistic-2.0
URLhttp://www.github.com/RGLab/flowStats
Bug Reportshttp://www.github.com/RGLab/flowStats/issues
Downloads rank1378
Source branchdevel
biocViewsCellBasedAssays, FlowCytometry, ImmunoOncology, Software

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageflowStats_4.25.0.tar.gz
Windows binary (x86_64)flowStats_4.25.0.zip
macOS binary (arm64)flowStats_4.25.0.tgz
macOS binary (x86_64)flowStats_4.25.0.tgz
Dependencies

Depends: R (>= 3.0.2)

Imports: BiocGenerics, MASS, flowCore (>= 1.99.6), flowWorkspace, ncdfFlow (>= 2.19.5), flowViz, fda (>= 2.2.6), Biobase, methods, grDevices, graphics, stats, cluster, utils, KernSmooth, lattice, ks, RColorBrewer, rrcov, corpcor, mnormt, clue

Suggests: xtable, testthat, openCyto, ggcyto, ggridges

Enhances: RBGL, graph

Reverse dependencies

Depends On Me (2): flowVS, highthroughputassays

Suggests Me (9): cydar, flowClust, flowCore, flowTime, flowViz, ggcyto, idendr0, ncdfFlow, openCyto