consensus

Cross-platform consensus analysis of genomic measurements via interlaboratory testing method

Bioconductor version: 3.24 · Package version: 1.31.0

An implementation of the American Society for Testing and Materials (ASTM) Standard E691 for interlaboratory testing procedures, designed for cross-platform genomic measurements. Given three (3) or more genomic platforms or laboratory protocols, this package provides interlaboratory testing procedures giving per-locus comparisons for sensitivity and precision between platforms.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("consensus")

Details

Maintainer	Tim Peters <t.peters@garvan.org.au>
Author	Tim Peters
License	BSD_3_clause + file LICENSE
Downloads rank	391
Source branch	devel
biocViews	DataRepresentation, GeneExpression, Microarray, QualityControl, RNASeq, Regression, Software

Documentation

Fitting and visualising row-linear models with \texttt{consensus}

Download

Follow the installation instructions to use this package in your R session.

Source package	consensus_1.31.0.tar.gz
Windows binary (x86_64)	consensus_1.31.0.zip
macOS binary (arm64)	consensus_1.31.0.tgz
macOS binary (x86_64)	consensus_1.31.0.tgz

Dependencies

Depends: R (>= 3.5), RColorBrewer

Imports: matrixStats, gplots, grDevices, methods, graphics, stats, utils

Suggests: knitr, RUnit, rmarkdown, BiocGenerics