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clippda

A package for the clinical proteomic profiling data analysis

Bioconductor version: 3.24 · Package version: 1.63.0

Methods for the nalysis of data from clinical proteomic profiling studies. The focus is on the studies of human subjects, which are often observational case-control by design and have technical replicates. A method for sample size determination for planning these studies is proposed. It incorporates routines for adjusting for the expected heterogeneities and imbalances in the data and the within-sample replicate correlations.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("clippda")

Details

MaintainerStephen Nyangoma <s.o.nyangoma@bham.ac.uk>
AuthorStephen Nyangoma
LicenseGPL (>=2)
URLhttp://www.cancerstudies.bham.ac.uk/crctu/CLIPPDA.shtml
Downloads rank555
Source branchdevel
biocViewsDifferentialExpression, MultipleComparison, OneChannel, Preprocessing, Proteomics, Software

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageclippda_1.63.0.tar.gz
Windows binary (x86_64)clippda_1.63.0.zip
macOS binary (arm64)clippda_1.63.0.tgz
macOS binary (x86_64)clippda_1.63.0.tgz
Dependencies

Depends: R (>= 2.13.1), limma, statmod, rgl, lattice, scatterplot3d, graphics, grDevices, stats, utils, Biobase, tools, methods