TnT

Interactive Visualization for Genomic Features

Bioconductor version: 3.24 · Package version: 1.35.0

A R interface to the TnT javascript library (https://github.com/ tntvis) to provide interactive and flexible visualization of track-based genomic data.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("TnT")

Details

Maintainer	Jialin Ma <marlin-@gmx.cn>
Author	Jialin Ma [cre, aut], Miguel Pignatelli [aut], Toby Hocking [aut]
License	AGPL-3
URL	https://github.com/Marlin-Na/TnT
Bug Reports	https://github.com/Marlin-Na/TnT/issues
Downloads rank	484
Source branch	devel
biocViews	Infrastructure, Software, Visualization

Documentation

Introduction to TnT

Download

Follow the installation instructions to use this package in your R session.

Source package	TnT_1.35.0.tar.gz
Windows binary (x86_64)	TnT_1.35.0.zip
macOS binary (arm64)	TnT_1.35.0.tgz
macOS binary (x86_64)	TnT_1.35.0.tgz

Dependencies

Depends: R (>= 3.4), GenomicRanges

Imports: methods, stats, utils, grDevices, htmlwidgets, jsonlite, data.table, Biobase, GenomeInfoDb, IRanges, S4Vectors, knitr

Suggests: GenomicFeatures, shiny, BiocManager, rmarkdown, testthat