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RPA

RPA: Robust Probabilistic Averaging for probe-level analysis

Bioconductor version: 3.24 · Package version: 1.69.0

Probabilistic analysis of probe reliability and differential gene expression on short oligonucleotide arrays.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RPA")

Details

MaintainerLeo Lahti <leo.lahti@iki.fi>
AuthorLeo Lahti [aut, cre] (ORCID: <https://orcid.org/0000-0001-5537-637X>)
LicenseBSD_2_clause + file LICENSE
URLhttps://github.com/antagomir/RPA
Bug Reportshttps://github.com/antagomir/RPA
Downloads rank607
Source branchdevel
biocViewsGeneExpression, Microarray, Preprocessing, QualityControl, Software

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageRPA_1.69.0.tar.gz
Windows binary (x86_64)RPA_1.69.0.zip
macOS binary (arm64)RPA_1.69.0.tgz
macOS binary (x86_64)RPA_1.69.0.tgz
Dependencies

Depends: R (>= 3.1.1), affy, BiocGenerics, BiocStyle, methods, rmarkdown

Imports: phyloseq

Suggests: knitr, parallel

Reverse dependencies

Depends On Me (1): prebs