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Prostar

Provides a GUI for DAPAR

Bioconductor version: 3.24 · Package version: 1.45.0

This package provides a GUI interface for the DAPAR package. The package Prostar (Proteomics statistical analysis with R) is a Bioconductor distributed R package which provides all the necessary functions to analyze quantitative data from label-free proteomics experiments. Contrarily to most other similar R packages, it is endowed with rich and user-friendly graphical interfaces, so that no programming skill is required.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Prostar")

Details

MaintainerSamuel Wieczorek <samuel.wieczorek@cea.fr>
AuthorThomas Burger [aut], Florence Combes [aut], Samuel Wieczorek [cre, aut], Manon Gaudin [ctb]
LicenseArtistic-2.0
URLhttp://www.prostar-proteomics.org/
Bug Reportshttps://github.com/edyp-lab/Prostar/issues
Downloads rank509
Source branchdevel
biocViewsGUI, MassSpectrometry, Normalization, Preprocessing, Proteomics, Software

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageProstar_1.45.0.tar.gz
Windows binary (x86_64)Prostar_1.45.0.zip
macOS binary (arm64)Prostar_1.45.0.tgz
macOS binary (x86_64)Prostar_1.45.0.tgz
Dependencies

Depends: R (>= 4.5.0)

Imports: DAPAR (>= 1.35.1), DAPARdata (>= 1.30.0), rhandsontable, data.table, shiny, shinyBS, shinyAce, plotly, htmlwidgets, webshot, shinythemes, later, shinycssloaders, future, promises, shinyjqui, tibble, ggplot2, gplots, shinyjs, vioplot, Biobase, DT, R.utils, RColorBrewer, XML, colourpicker, gtools, markdown, rclipboard, sass, shinyTree, shinyWidgets

Suggests: BiocStyle, BiocManager, testthat, knitr