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OrderedList

Similarities of Ordered Gene Lists

Bioconductor version: 3.24 · Package version: 1.85.0

Detection of similarities between ordered lists of genes. Thereby, either simple lists can be compared or gene expression data can be used to deduce the lists. Significance of similarities is evaluated by shuffling lists or by resampling in microarray data, respectively.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("OrderedList")

Details

MaintainerClaudio Lottaz <Claudio.Lottaz@klinik.uni-regensburg.de>
AuthorXinan Yang, Stefanie Scheid, Claudio Lottaz
LicenseGPL (>= 2)
URLhttp://compdiag.molgen.mpg.de/software/OrderedList.shtml
Downloads rank570
Source branchdevel
biocViewsDifferentialExpression, Microarray, MultipleComparison, Software

Download

Follow the installation instructions to use this package in your R session.

Source packageOrderedList_1.85.0.tar.gz
macOS binary (arm64)OrderedList_1.85.0.tgz
macOS binary (x86_64)OrderedList_1.85.0.tgz
Dependencies

Depends: R (>= 3.6.1), Biobase, twilight

Imports: methods