NanoStringNCTools
NanoString nCounter Tools
Bioconductor version: 3.24 · Package version: 1.21.2
Tools for NanoString Technologies nCounter Technology. Provides support for reading RCC files into an ExpressionSet derived object. Also includes methods for QC and normalizaztion of NanoString data.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("NanoStringNCTools")Details
| Maintainer | Maddy Griswold <mgriswold@nanostring.com> |
| Author | Patrick Aboyoun [aut], Nicole Ortogero [aut], Maddy Griswold [cre], Zhi Yang [ctb] |
| License | MIT |
| Downloads rank | 880 |
| Source branch | devel |
| biocViews | CellBasedAssays, DataImport, GeneExpression, ProprietaryPlatforms, Proteomics, RNASeq, Software, Transcription, Transcriptomics, mRNAMicroarray |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | NanoStringNCTools_1.21.2.tar.gz |
| Windows binary (x86_64) | NanoStringNCTools_1.21.2.zip |
| macOS binary (arm64) | NanoStringNCTools_1.21.2.tgz |
| macOS binary (x86_64) | NanoStringNCTools_1.21.2.tgz |
Dependencies
Depends: R (>= 3.6), Biobase, S4Vectors, ggplot2
Imports: BiocGenerics, Biostrings, ggbeeswarm, ggiraph, ggthemes, grDevices, IRanges, methods, pheatmap, RColorBrewer, stats, utils