MetID

Network-based prioritization of putative metabolite IDs

Bioconductor version: 3.24 · Package version: 1.31.0

This package uses an innovative network-based approach that will enhance our ability to determine the identities of significant ions detected by LC-MS.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MetID")

Details

Maintainer	Zhenzhi Li <zzrickli@gmail.com>
Author	Zhenzhi Li <zzrickli@gmail.com>
License	Artistic-2.0
URL	https://github.com/ressomlab/MetID
Downloads rank	378
Source branch	devel
biocViews	AssayDomain, BiologicalQuestion, Infrastructure, KEGG, Network, ResearchField, Software, StatisticalMethod, Technology, WorkflowStep

Documentation

Introduction to MetID

Download

Follow the installation instructions to use this package in your R session.

Source package	MetID_1.31.0.tar.gz
Windows binary (x86_64)	MetID_1.31.0.zip
macOS binary (arm64)	MetID_1.31.0.tgz
macOS binary (x86_64)	MetID_1.31.0.tgz

Dependencies

Depends: R (>= 3.5)

Imports: utils (>= 3.3.1), stats (>= 3.4.2), devtools (>= 1.13.0), stringr (>= 1.3.0), Matrix (>= 1.2-12), igraph (>= 1.2.1), ChemmineR (>= 2.30.2)

Suggests: knitr (>= 1.19), rmarkdown (>= 1.8)