MBAmethyl
Model-based analysis of DNA methylation data
Bioconductor version: 3.24 · Package version: 1.47.0
This package provides a function for reconstructing DNA methylation values from raw measurements. It iteratively implements the group fused lars to smooth related-by-location methylation values and the constrained least squares to remove probe affinity effect across multiple sequences.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MBAmethyl") Details
| Maintainer | Tao Wang <tao.wang.tw376@yale.edu> |
| Author | Tao Wang, Mengjie Chen |
| License | Artistic-2.0 |
| Downloads rank | 325 |
| Source branch | devel |
| biocViews | DNAMethylation, MethylationArray, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | MBAmethyl_1.47.0.tar.gz |
| Windows binary (x86_64) | MBAmethyl_1.47.0.zip |
| macOS binary (arm64) | MBAmethyl_1.47.0.tgz |
| macOS binary (x86_64) | MBAmethyl_1.47.0.tgz |
Dependencies
Depends: R (>= 2.15)