LoomExperiment
LoomExperiment container
Bioconductor version: 3.24 · Package version: 1.31.0
The LoomExperiment package provide a means to easily convert the Bioconductor "Experiment" classes to loom files and vice versa.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("LoomExperiment")Details
| Maintainer | Bioconductor Package Maintainer <maintainer@bioconductor.org> |
| Author | Martin Morgan, Daniel Van Twisk |
| License | Artistic-2.0 |
| Downloads rank | 872 |
| Source branch | devel |
| biocViews | DataImport, DataRepresentation, ImmunoOncology, Infrastructure, SingleCell, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | LoomExperiment_1.31.0.tar.gz |
| Windows binary (x86_64) | LoomExperiment_1.31.0.zip |
| macOS binary (arm64) | LoomExperiment_1.31.0.tgz |
| macOS binary (x86_64) | LoomExperiment_1.31.0.tgz |
Dependencies
Depends: R (>= 3.5.0), S4Vectors, SingleCellExperiment, SummarizedExperiment, methods, rhdf5, BiocIO
Imports: DelayedArray, GenomicRanges, HDF5Array, Matrix, stats, stringr, utils
Suggests: testthat, BiocStyle, knitr, rmarkdown, reticulate
Reverse dependencies
Suggests Me (1): adverSCarial