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ISoLDE

Integrative Statistics of alleLe Dependent Expression

Bioconductor version: 3.24 · Package version: 1.41.0

This package provides ISoLDE a new method for identifying imprinted genes. This method is dedicated to data arising from RNA sequencing technologies. The ISoLDE package implements original statistical methodology described in the publication below.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ISoLDE")

Details

MaintainerChristelle Reynès <christelle.reynes@igf.cnrs.fr>
AuthorChristelle Reynès [aut, cre], Marine Rohmer [aut], Guilhem Kister [aut]
LicenseGPL (>= 2.0)
URLwww.r-project.org
Downloads rank343
Source branchdevel
biocViewsEpigenetics, GeneExpression, GeneRegulation, GeneSetEnrichment, GeneticVariability, Genetics, ImmunoOncology, MathematicalBiology, MultipleComparison, RNASeq, SNP, Sequencing, Software, Transcription

Download

Follow the installation instructions to use this package in your R session.

Source packageISoLDE_1.41.0.tar.gz
Windows binary (x86_64)ISoLDE_1.41.0.zip
macOS binary (arm64)ISoLDE_1.41.0.tgz
macOS binary (x86_64)ISoLDE_1.41.0.tgz
Dependencies

Depends: R (>= 3.3.0), graphics, grDevices, stats, utils