GeneBreak
Gene Break Detection
Bioconductor version: 3.24 · Package version: 1.43.0
Recurrent breakpoint gene detection on copy number aberration profiles.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GeneBreak")Details
| Maintainer | Evert van den Broek <vandenbroek.evert@gmail.com> |
| Author | Evert van den Broek, Stef van Lieshout |
| License | GPL-2 |
| URL | https://github.com/stefvanlieshout/GeneBreak |
| Downloads rank | 574 |
| Source branch | devel |
| biocViews | CopyNumberVariation, DNASeq, Genetics, Sequencing, Software, Visualization, WholeGenome, aCGH |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | GeneBreak_1.43.0.tar.gz |
| Windows binary (x86_64) | GeneBreak_1.43.0.zip |
| macOS binary (arm64) | GeneBreak_1.43.0.tgz |
| macOS binary (x86_64) | GeneBreak_1.43.0.tgz |
Dependencies
Depends: R (>= 3.2), QDNAseq, CGHcall, CGHbase, GenomicRanges