CellMapper
Predict genes expressed selectively in specific cell types
Bioconductor version: 3.24 · Package version: 1.39.0
Infers cell type-specific expression based on co-expression similarity with known cell type marker genes. Can make accurate predictions using publicly available expression data, even when a cell type has not been isolated before.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("CellMapper") Details
| Maintainer | Brad Nelms <bnelms.research@gmail.com> |
| Author | Brad Nelms |
| License | Artistic-2.0 |
| Downloads rank | 451 |
| Source branch | devel |
| biocViews | GeneExpression, Microarray, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | CellMapper_1.39.0.tar.gz |
| Windows binary (x86_64) | CellMapper_1.39.0.zip |
| macOS binary (arm64) | CellMapper_1.39.0.tgz |
| macOS binary (x86_64) | CellMapper_1.39.0.tgz |
Dependencies
Suggests: CellMapperData, Biobase, HumanAffyData, ALL, BiocStyle, ExperimentHub
Reverse dependencies
Depends On Me (1): CellMapperData