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BiocSklearn

interface to python sklearn via Rstudio reticulate

Bioconductor version: 3.24 · Package version: 1.35.0

This package provides interfaces to selected sklearn elements, and demonstrates fault tolerant use of python modules requiring extensive iteration.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BiocSklearn")

Details

MaintainerVince Carey <stvjc@channing.harvard.edu>
AuthorVince Carey [cre, aut]
LicenseArtistic-2.0
System Requirementspython (>= 2.7), sklearn, numpy, pandas, h5py
Downloads rank399
Source branchdevel
biocViewsDimensionReduction, Infrastructure, Software, StatisticalMethod

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageBiocSklearn_1.35.0.tar.gz
Windows binary (x86_64)BiocSklearn_1.35.0.zip
macOS binary (arm64)BiocSklearn_1.35.0.tgz
macOS binary (x86_64)BiocSklearn_1.35.0.tgz
Dependencies

Depends: R (>= 4.0), reticulate, methods, SummarizedExperiment

Imports: basilisk

Suggests: testthat, HDF5Array, BiocStyle, rmarkdown, knitr