ASSET
An R package for subset-based association analysis of heterogeneous traits and subtypes
Bioconductor version: 3.24 · Package version: 2.31.0
An R package for subset-based analysis of heterogeneous traits and disease subtypes. The package allows the user to search through all possible subsets of z-scores to identify the subset of traits giving the best meta-analyzed z-score. Further, it returns a p-value adjusting for the multiple-testing involved in the search. It also allows for searching for the best combination of disease subtypes associated with each variant.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ASSET") Details
| Maintainer | Samsiddhi Bhattacharjee <sb1@nibmg.ac.in> |
| Author | Samsiddhi Bhattacharjee [aut, cre], Guanghao Qi [aut], Nilanjan Chatterjee [aut], William Wheeler [aut] |
| License | GPL-2 + file LICENSE |
| Downloads rank | 499 |
| Source branch | devel |
| biocViews | GenomeWideAssociation, MultipleComparison, SNP, Software, StatisticalMethod |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | ASSET_2.31.0.tar.gz |
| Windows binary (x86_64) | ASSET_2.31.0.zip |
| macOS binary (arm64) | ASSET_2.31.0.tgz |
| macOS binary (x86_64) | ASSET_2.31.0.tgz |
Reverse dependencies
Depends On Me (1): REBET