AIMS
AIMS : Absolute Assignment of Breast Cancer Intrinsic Molecular Subtype
Bioconductor version: 3.24 · Package version: 1.45.0
This package contains the AIMS implementation. It contains necessary functions to assign the five intrinsic molecular subtypes (Luminal A, Luminal B, Her2-enriched, Basal-like, Normal-like). Assignments could be done on individual samples as well as on dataset of gene expression data.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("AIMS") Details
| Maintainer | Eric R Paquet <eric.r.paquet@gmail.com> |
| Author | Eric R. Paquet, Michael T. Hallett |
| License | Artistic-2.0 |
| URL | http://www.bci.mcgill.ca/AIMS |
| Downloads rank | 921 |
| Source branch | devel |
| biocViews | Classification, GeneExpression, ImmunoOncology, Microarray, RNASeq, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | AIMS_1.45.0.tar.gz |
| Windows binary (x86_64) | AIMS_1.45.0.zip |
| macOS binary (arm64) | AIMS_1.45.0.tgz |
| macOS binary (x86_64) | AIMS_1.45.0.tgz |
Dependencies
Depends: R (>= 2.10), e1071, Biobase
Suggests: breastCancerVDX, hgu133a.db, RUnit, BiocGenerics
Reverse dependencies
Depends On Me (1): genefu