Batch-Aware Cell Quality Control for Single-Cell RNA-seq

---

Documentation for package ‘scBatchQC’ version 0.99.3

• DESCRIPTION file
• User guides, package vignettes and other documentation
• Package NEWS
• Package README

Help Pages

scBatchQC-package	scBatchQC: Batch-Aware Cell Quality Control for scRNA-seq
batchAwareQCMetrics	Batch-Aware QC Metric Computation
batchSummary	Accessor for batch summary in a BQCResult
batchSummary-method	Accessor for batch summary in a BQCResult
BQCResult	Constructor for BQCResult
BQCResult-class	BQCResult: Batch-Aware QC Result Container
doubletScores	Accessor for doublet scores in a BQCResult
doubletScores-method	Accessor for doublet scores in a BQCResult
estimateBatchDoubletRate	Estimate Per-Batch Doublet Rates
harmonizeQCThresholds	Harmonize QC Thresholds Across Batches
plotBatchQC	Visualize QC Metric Distributions Across Batches
qcFlags	Accessor for QC flags in a BQCResult
qcFlags-method	Accessor for QC flags in a BQCResult
scBatchQC	scBatchQC: Batch-Aware Cell Quality Control for scRNA-seq
show-method	Show method for BQCResult