DuckDBFile              Constructor for DuckDBFile objects
DuckDBFile-class        DuckDBFile objects
asRanges                Extract genomic ranges from dbSequence objects
as_granges              Convert objects to GRanges
as_ranges-dbSequence-method
                        Extract range columns as a view
coerce-methods          Coercion methods between dbSequence and GRanges
compute.dbSequence      Materialize a dbSequence in DuckDB
compute_coverage        Compute coverage over a region
dbSequence              Constructor for dbSequence objects
dbSequence-class        dbSequence objects
fileSource              Accessor for file_source slot
filter_by_overlaps      Filter ranges by overlap
import,BEDFile,missing,ANY-method
                        Import BED files into DuckDB
import,BamFile,missing,ANY-method
                        Import BAM files into DuckDB
import,FastaFile,missing,ANY-method
                        Import FASTA files into DuckDB
import,GFFFile,missing,ANY-method
                        Import GFF files into DuckDB
import,GTFFile,missing,ANY-method
                        Import GTF files into DuckDB
import,VcfFile,missing,ANY-method
                        Import VCF files into DuckDB
import,character,missing,ANY-method
                        Import character file paths into DuckDB
                        (auto-detect format)
pool                    Pool (aggregate) values by grouping columns
read_bam                Read a BAM file into DuckDB
read_bed                Read a BED file into DuckDB
read_gff                Read a GFF/GTF file into DuckDB
read_vcf                Read a VCF file into DuckDB
show,DuckDBFile-method
                        Show method for DuckDBFile objects
show,dbSequence-method
                        Show method for dbSequence objects
tableName               Get table name from dbSequence
