9ad3327ad7cb720a00f5ededf61805dd *DESCRIPTION
aaef72241761a070327e95cce045080a *INDEX
b0cd808fda6e1b0d5a1b5c092546e2d0 *LICENSE
fcd2f3edeb4d22926802935cdb3553d0 *Meta/Rd.rds
69311cba1063926191c35f67bcc75e38 *Meta/data.rds
8bd78fe4d71c3aeb1a0f4982ee51622b *Meta/features.rds
c28999fa4ac4eaba3dd92ad5fce068b3 *Meta/hsearch.rds
e1b3e05c8b58f92ab6e0f0ff7087b2b5 *Meta/links.rds
7deb3157bdb8ed27b5ede88d58add409 *Meta/nsInfo.rds
e0a0c09edaa89e161855166b42d15679 *Meta/package.rds
935c5abde0caddb4ba0208a44e0a0f88 *Meta/vignette.rds
16b475cdcc42e823b491e2fcc08de3d9 *NAMESPACE
080f51a12f0a7dd20a2a6a2389489b0e *NEWS.md
d6c68f1fe41ced6e98a766a3757313da *R/UPDhmm
dfb928c9382b97bd8157c75c11d117de *R/UPDhmm.rdb
b594e6f2d27a6d65dc063c227e2ac4e3 *R/UPDhmm.rdx
d65a01340a841be41ab24b32477ec0fe *README.md
4b0748939e433b281b442c26178227ec *data/hmm.rda
1444bee349adbbf6ef14693a8a56e1f8 *doc/UPDhmm.R
aeb0e766d604e14fecd4cd627033eb0b *doc/UPDhmm.Rmd
7258bcb9fc2b45c0aa2b05cf4164bb2b *doc/UPDhmm.html
01bb619104ee3953ad3b674e5a8a41bd *doc/index.html
a547c0f5213329b1b9bb505b0fd62f06 *doc/long-reads-processing.R
dc1e1f70defe728e45ae8d5b9dfe2234 *doc/long-reads-processing.Rmd
459112ae9b012bc75fdb1790440a83ed *doc/long-reads-processing.html
a547c0f5213329b1b9bb505b0fd62f06 *doc/preprocessing.R
c885d1033579f62a71bfb4158dc1dc80 *doc/preprocessing.Rmd
21c625811cfdb58422e2d75e8b3767f4 *doc/preprocessing.html
56130c12f76862f6595a9fea2f650f1a *extdata/SFARI.bed
a65faf60f1a582739a39a4d9adf41559 *extdata/sample1.vcf.gz
d567eb45a541e997bfe2276a236f11f9 *extdata/sample2.vcf.gz
d567eb45a541e997bfe2276a236f11f9 *extdata/test.vcf.gz
a65faf60f1a582739a39a4d9adf41559 *extdata/test_het_mat.vcf.gz
f4a46bb30fde5d075c20c759587f8f01 *help/AnIndex
19ed1459e1d2fdea17d128e14ce6d422 *help/UPDhmm.rdb
d866974f048cd41c8e770a4c4a825be4 *help/UPDhmm.rdx
518fa2cdfca3eb13da3ccf079399806e *help/aliases.rds
79a15acccb49eb9532a82ef23aa6cb0e *help/paths.rds
6a8b13e98ffee5490d6fbe5ce7dda16d *html/00Index.html
ee41876c0116916bb04bcf4fe3e43d78 *html/R.css
2b0958b095c603692c3310325bb26a2d *scripts/cnps.bed
6ee6379e335c1a7e4b87de35b4c5cc0f *scripts/extractTrioNA19675.sh
42a4748634a797bbc5912626007363ba *scripts/getFilesExdata.sh
ae51d30ddbdd7506848a992e8eb62110 *scripts/simulation3q.R
