Reactome Pathway Analysis
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Documentation for package ‘ReactomePA’ version 1.99.2
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| bayes_reactome | Bayesian term selection for Reactome enrichment results |
| DataSet | Datasets sample contains a sample of gene IDs. |
| enrichPathway | Pathway Enrichment Analysis of a gene set. Given a vector of genes, this function will return the enriched pathways with FDR control. |
| getDb | getDb |
| gsePathway | gsePathway |
| gson_Reactome | gson_Reactome |
| nsePathway | Network-based Reactome pathway enrichment analysis |
| prepareReactomeNetwork | Prepare Reactome reaction network for NSEA |
| viewPathway | viewPathway |