Package: PostChicago
Type: Package
Title: PostChicago - visualization and integration of Capture-(Hi)C
        data
Version: 0.99.3
Authors@R: c(
    person(
      "Angelika", "Feldmann",
      email = "angelika.feldmann@dkfz-heidelberg.de",
      role = c("aut", "cre"),
      comment = c(ORCID="0000-0001-7094-8081")
    ),
	person(
      "Samuel", "Krall",
      email = "sammikrall@gmail.com",
      role = c("aut")
    ),
	person(
      "Belinda", "Blum",
      email = "belinda.blum@dkfz.de",
      role = c("aut")
    )
  )
Description: PostCHiCAGO (stylized from here as PostChicago) is a
        toolbox for visualising and assessing the output from the
        CHiCAGO pipeline (SOURCE). The plots created by PostChicago
        show reads or CHiCAGO scores over different regions.
        PostChicago can integrate different experiments with other
        types of datasets and compare separate conditions.
biocViews: Software, GeneRegulation, Epigenetics, Visualization
License: Artistic-2.0
URL: https://github.com/FeldmannLabDKFZ/PostChicago
Encoding: UTF-8
RoxygenNote: 7.3.3
Imports: GenomicRanges, pheatmap, S4Vectors, IRanges, ggplot2,
        RColorBrewer, Chicago, utils, graphics, grDevices, stringr,
        gridExtra, BiocFileCache, matrixStats, rtracklayer, patchwork,
        dplyr, tidyr, rlang
Suggests: knitr, rmarkdown, testthat (>= 3.0.0), data.table,
        BiocGenerics, codetools, BiocStyle, ragg
Config/testthat/edition: 3
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2026-09-03 18:58:50 UTC; root
Depends: R (>= 4.4.0)
Config/pak/sysreqs: cmake make libbz2-dev libicu-dev liblzma-dev
        libuv1-dev libxml2-dev libssl-dev xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-09-03 12:22:08 UTC
RemoteUrl: https://github.com/bioc/PostChicago
RemoteRef: HEAD
RemoteSha: 865ba5936f89143aca8c1571d2789df12f9ac7b8
Author: Angelika Feldmann [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-7094-8081>),
  Samuel Krall [aut],
  Belinda Blum [aut]
Maintainer: Angelika Feldmann <angelika.feldmann@dkfz-heidelberg.de>
Built: R 4.6.1; ; 2026-09-03 19:07:22 UTC; unix
