Seahtrue revives XF data for structured data analysis


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Documentation for package ‘seahtrue’ version 1.7.1

Help Pages

calculate_space Calculate Bioenergetic Indices from OCR and ECAR Data
glue_xfplates Glueing mulltiple plates from a folder
plot_bioenergetic_space Plot Bioenergetic Space for Each Group
plot_bioenergetic_trajectory Plot Metabolic Trajectories in J-space
revive_output_donor_A Dataset PBMC donor A
revive_xfplate Read, Preprocess, and Validate Seahorse XF Excel File
sketch_assimilate_rate Combine multiple revived xf plates into one plot for rate data
sketch_assimilate_raw Combine multiple revived xf plates into one plot for raw data
sketch_plate Make an overview of plate layout, with colored groups
sketch_rate Generate a plot for the rate data