Package: procoil
Type: Package
Title: Prediction of Oligomerization of Coiled Coil Proteins
Version: 2.41.0
Date: 2025-09-19
Depends: R (>= 3.3.0), kebabs
Imports: methods, stats, graphics, S4Vectors, Biostrings, utils
Suggests: knitr
Authors@R: c(person(given = "Ulrich",
                    family = "Bodenhofer",
                    role = c("aut", "cre"),
                    email = "ulrich@bodenhofer.com"))
Maintainer: Ulrich Bodenhofer <ulrich@bodenhofer.com>
Description: The package allows for predicting whether a coiled coil
        sequence (amino acid sequence plus heptad register) is more
        likely to form a dimer or more likely to form a trimer.
        Additionally to the prediction itself, a prediction profile is
        computed which allows for determining the strengths to which
        the individual residues are indicative for either class.
        Prediction profiles can also be visualized as curves or
        heatmaps.
License: GPL (>= 2)
Collate: AllClasses.R access-methods.R show-methods.R plot-methods.R
        predict-methods.R weights-methods.R profile-methods.R
        readCCModel.R writeCCModel.R fitted-methods.R heatmap-methods.R
URL: https://github.com/UBod/procoil
VignetteBuilder: knitr
LazyLoad: yes
LazyData: yes
biocViews: Proteomics, Classification, SupportVectorMachine
Config/pak/sysreqs: zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:35:09 UTC
RemoteUrl: https://github.com/bioc/procoil
RemoteRef: HEAD
RemoteSha: d61ff9fa2c89c7e0b5bd6f10e8462ea6c6c466e5
NeedsCompilation: no
Packaged: 2026-04-30 15:16:24 UTC; root
Author: Ulrich Bodenhofer [aut, cre]
Built: R 4.6.0; ; 2026-04-30 16:46:55 UTC; unix
