HicAggR-package	HicAggR-package
Aggregation	Aggregation
BalanceHiC	BalanceHiC
Beaf32_Peaks.gnr	Beaf32_Peaks.gnr
BinGRanges	BinGRanges
CompareToBackground	compareToBackground
CutHiC	CutHiC
ExtractSubmatrix	ExtractSubmatrix
FilterInteractions	FilterInteractions
GenomicSystem	GenomicSystem
GetInfo	GetInfo
GetQuantif	GetQuantif
ggAPA	ggAPA
HicAggR	HicAggR-package
HiC_Ctrl.cmx_lst	HiC_Ctrl.cmx_lst
HiC_HS.cmx_lst	HiC_HS.cmx_lst
Hue	Hue
ICEnorm	ICEnorm
ImportHiC	ImportHiC
IndexFeatures	IndexFeatures
JoinHiC	JoinHiC
MergeGRanges	MergeGRanges
OrientateMatrix	OrientateMatrix
OverExpectedHiC	OverExpectedHiC
PlotAPA	PlotAPA
plotMultiAPA	plotMultiAPA
PrepareMtxList	PrepareMtxList
preparePlotgardener	preparePlotgardener
QtlThreshold	QtlThreshold
ReduceRun	ReduceRun
ResizeMatrix	ResizeMatrix
SearchPairs	SearchPairs
SeqEnds	SeqEnds
StrToGRanges	StrToGRanges
SwitchMatrix	SwitchMatrix
TADs_Domains.gnr	TADs_Domains.gnr
TrimOutliers	TrimOutliers
TSS_Peaks.gnr	TSS_Peaks.gnr
VCnorm	VCnorm
viridis	viridis
WrapFunction	WrapFunction
YlGnBu	YlGnBu
YlOrRd	YlOrRd
