variants
Annotating Genomic Variants
Bioconductor version: 3.23 · Package version: 1.36.0
Read and write VCF files. Identify structural location of variants and compute amino acid coding changes for non-synonymous variants. Use SIFT and PolyPhen database packages to predict consequence of amino acid coding changes.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("variants")Details
| Maintainer | Bioconductor Package Maintainer <maintainer@bioconductor.org> |
| Author | Valerie Obenchain [aut], Martin Morgan [ctb], Bioconductor Package Maintainer [cre] |
| License | Artistic-2.0 |
| URL | https://bioconductor.org/help/workflows/variants/ |
| Downloads rank | 143 |
| Source branch | RELEASE_3_23 |
| biocViews | AnnotationWorkflow, ImmunoOncologyWorkflow, Workflow |
Download
Follow the installation instructions to use this package in your R session.
| Source package | variants_1.36.0.tar.gz |