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HiCDataHumanIMR90

Human IMR90 Fibroblast HiC data from Dixon et al. 2012

Bioconductor version: 3.23 · Package version: 1.32.0

The HiC data from Human Fibroblast IMR90 cell line (HindIII restriction) was retrieved from the GEO website, accession number GSE35156 (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE35156). The raw reads were processed as explained in Dixon et al. (Nature 2012).

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("HiCDataHumanIMR90")

Details

MaintainerNicolas Servant <Nicolas.Servant@curie.fr>
AuthorNicolas Servant
LicenseGPL-3
Downloads rank167
Source branchRELEASE_3_23
biocViewsExperimentData, GEO, Genome, Homo_sapiens_Data

Download

Follow the installation instructions to use this package in your R session.

Source packageHiCDataHumanIMR90_1.32.0.tar.gz
Dependencies

Depends: R (>= 3.5.0)

Suggests: HiTC, BiocStyle

Reverse dependencies

Suggests Me (1): HiTC