Changes in version 1.00.4                        

  - Add check.names = FALSE to all data.frame() calls to better handle
    special characters.
  - The heatmap view defaults to mean grouping by the user selected
    metadata values

                       Changes in version 1.00.3                        

  - New config capability to pre-select plotting options (e.g. genes,
    assay slot, sample groupings). Can also output a configuration file
    based on the current customization.

  - Plotting options can also be loaded in via the via
    metadata(rse)$geyser_config as a list

  - Heatmap can now optionally flip axes and can collapse individual
    samples to the group level

                       Changes in version 1.00.2                        

  - Geyser looks for information in the $metadata slot to print on the
    loading screen.
  - Faceting adds in user-selected rowData info (instead of being
    hardcoded to rowname).
  - Fixed bug in point labels where it was not adjusting to the y-axis
    jitter.

                       Changes in version 1.00.1                        

Geyser now has the ability to load an SCE from an .rds file (when called
with geyser(), no arguments). Geyser now has color palettes (pals and
ggplot2), custom plot height, optional points plotting, metadata-group
based filtering, and optional point text labeling. Point spread logic
was changed from geom_beeswarm to geom_quasirandom as I found the former
had some odd behavior with point spread in larger sample datasets.
Geyser now has a persistent file loader.

                       Changes in version 0.99.8                        

Add BiocStyles to import (failed on "nebbiolo1" automated build testing)

                       Changes in version 0.99.7                        

  - User can now select features (rows) from the rowData slot.
    Previously was only using the row.names of the SummarizedExperiment
    object

                       Changes in version 0.99.6                        

  - Make some internal column names more unique, change license to CC0

                       Changes in version 0.99.5                        

  - factor order respected in heatmap also (previously was just the dot
    plot)

                       Changes in version 0.99.4                        

  - xlab text matches slot selected
  - factor order respected for (SINGLE) sample grouping in plot
  - optional color for a single column

                       Changes in version 0.99.3                        

  - updated bslib requirement to >= 0.6.0
  - replaced a "=" with "->"
  - fixed empty comma error in the Shiny UI
  - tweak wording and plot size in the plotting view

                       Changes in version 0.99.2                        

  - addressing https://github.com/Bioconductor/Contributions/issues/3107
    - Thanks
  - replaced T/F with TRUE/FALSE
  - fixed bug in vignette example (removed unnecessary
    SummarizedExperiment call) - Thanks @federicomarini
  - added inst/extdata/make_tiny_rse.R which reproduces the tiny_rse
    example data
  - changed vignette style to BiocStyle::html_document
  - updated DESCRIPTION with urls
  - reduce full import of outside packages
  - Expanded unit testing suite for the box plot and heatmap generating
    functions
  - lightly refactored the internal .exp_plot and .hm_plot functions to
    stop weird errors with testthat unit testing

                       Changes in version 0.99.1                        

  - fixed bug in vignette yaml

                       Changes in version 0.99.0                        

  - submitted to Bioconductor

                       Changes in version 0.30.0                        

  - Added a NEWS.md file to track changes to the package.
  - Restructure ui.R/server.R to put the code directly into
    geyser::geyser.R to better match bioconductor style
  - Better error handling for low value rows
  - Removed one "in app" guide as the info is in the vignette