Changes in version 2.3.1 (2026-01-06)                  

  - Updated documentation for sumstats2qtle() to remove warning.

                 Changes in version 2.1.3 (2025-10-27)                  

  - Changed the data loading function sumstats2qtle().
      - Added a flag to skip checking for multiple association tests for
        combinations of state, feature and variant.
      - Replaced a left_join with a match which should be faster.

                 Changes in version 2.1.2 (2025-09-30)                  

  - Added support for QTLExperiment objects with only one state, i.e.
    one column.
      - sumstats2qtle() can read in data when input has only one path.
      - mockQTLE() allows nStates = 1.

                 Changes in version 2.1.1 (2025-07-14)                  

  - subset function is now a generic.

                 Changes in version 1.99.3 (2025-05-26)                 

  - Fixed sumstats2qtle function so that the betas, errors and pvalues
    are matrices and not data.frames.

                 Changes in version 1.99.2 (2025-04-11)                 

  - Updated the function sumstats2qtle to print a warning when there are
    duplicate row names.

                 Changes in version 1.99.1 (2025-03-05)                 

  - Major update to the underlying representation of the slots.
      - Slots now use elementMetadata and colData.
      - No longer use internal col and row Data.
      - Almost all functions have been updated and testing is working
        but there may still be some edge cases that I have missed.
      - Better consistency with other child classes of
        SingleCellExperiment.

                 Changes in version 1.5.0 (2024-10-30)                  

  - Added a test for object validity error messages

                 Changes in version 1.3.0 (2024-05-01)                  

  - Minor changes to tests
  - Typo and indentation in vignette

                 Changes in version 0.99.6 (2023-10-19)                 

  - Added return statements for all documentation files. This removes
    the warning from BiocCheck()

                 Changes in version 0.99.5 (2023-10-19)                 

  - Added a few tests for internal functions

                 Changes in version 0.99.4 (2023-10-18)                 

  - Updated description and readme
  - Improved indentation consistency
  - Split the miscellaneous documentation file into two

                 Changes in version 0.99.3 (2023-10-10)                 

  - Removed all external downloads by bundling data into package

                 Changes in version 0.99.2 (2023-10-03)                 

  - Added testing during R CMD check
  - Added more examples and updated documentation
  - Added support for additional colData in sumstats2QTL()

                 Changes in version 0.99.1 (2023-09-28)                 

  - Small tweaks e.g. using seq_along()

                 Changes in version 0.99.0 (2023-09-28)                 

  - Submitted to Bioconductor