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semisup

Semi-Supervised Mixture Model

Bioconductor version: 3.23 · Package version: 1.36.0

Implements a parametric semi-supervised mixture model. The permutation test detects markers with main or interactive effects, without distinguishing them. Possible applications include genome-wide association analysis and differential expression analysis.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("semisup")

Details

MaintainerArmin Rauschenberger <armin.rauschenberger@uni.lu>
AuthorArmin Rauschenberger [aut, cre]
LicenseGPL-3
URLhttps://github.com/rauschenberger/semisup
Bug Reportshttps://github.com/rauschenberger/semisup/issues
Downloads rank357
Source branchRELEASE_3_23
biocViewsClassification, Clustering, DNASeq, Genetics, GenomicVariation, Microarray, MultipleComparison, SNP, Software, SomaticMutation

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packagesemisup_1.36.0.tar.gz
Windows binary (x86_64)semisup_1.36.0.zip
macOS binary (arm64)semisup_1.36.0.tgz
macOS binary (x86_64)semisup_1.36.0.tgz
Dependencies

Depends: R (>= 3.0.0)

Imports: VGAM

Suggests: knitr, testthat, SummarizedExperiment