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mygene

Access MyGene.Info_ services

Bioconductor version: 3.23 · Package version: 1.48.0

MyGene.Info_ provides simple-to-use REST web services to query/retrieve gene annotation data. It's designed with simplicity and performance emphasized. *mygene*, is an easy-to-use R wrapper to access MyGene.Info_ services.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("mygene")

Details

MaintainerAdam Mark, Cyrus Afrasiabi, Chunlei Wu <cwu@scripps.edu>
AuthorAdam Mark, Ryan Thompson, Cyrus Afrasiabi, Chunlei Wu
LicenseArtistic-2.0
Downloads rank781
Source branchRELEASE_3_23
biocViewsAnnotation, Software

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packagemygene_1.48.0.tar.gz
Windows binary (x86_64)mygene_1.48.0.zip
macOS binary (arm64)mygene_1.48.0.tgz
macOS binary (x86_64)mygene_1.48.0.tgz
Dependencies

Depends: R (>= 3.2.1), GenomicFeatures, txdbmaker

Imports: methods, utils, stats, httr (>= 0.3), jsonlite (>= 0.9.7), Hmisc, sqldf, plyr, S4Vectors

Suggests: BiocStyle

Reverse dependencies

Imports Me (1): MetaboSignal

Suggests Me (1): CRISPRball