methylMnM
detect different methylation level (DMR)
Bioconductor version: 3.23 · Package version: 1.50.0
To give the exactly p-value and q-value of MeDIP-seq and MRE-seq data for different samples comparation.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("methylMnM")Details
| Maintainer | Yan Zhou<zhouy1016@163.com> |
| Author | Yan Zhou, Bo Zhang, Nan Lin, BaoXue Zhang and Ting Wang |
| License | GPL-3 |
| Downloads rank | 589 |
| Source branch | RELEASE_3_23 |
| biocViews | DNAMethylation, Sequencing, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | methylMnM_1.50.0.tar.gz |
| Windows binary (x86_64) | methylMnM_1.50.0.zip |
| macOS binary (arm64) | methylMnM_1.50.0.tgz |
| macOS binary (x86_64) | methylMnM_1.50.0.tgz |
Dependencies
Depends: R (>= 2.12.1), edgeR, statmod
Reverse dependencies
Imports Me (1): SIMD