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lmdme

Linear Model decomposition for Designed Multivariate Experiments

Bioconductor version: 3.23 · Package version: 1.54.0

linear ANOVA decomposition of Multivariate Designed Experiments implementation based on limma lmFit. Features: i)Flexible formula type interface, ii) Fast limma based implementation, iii) p-values for each estimated coefficient levels in each factor, iv) F values for factor effects and v) plotting functions for PCA and PLS.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("lmdme")

Details

MaintainerCristobal Fresno <cfresno@bdmg.com.ar>
AuthorCristobal Fresno and Elmer A. Fernandez
LicenseGPL (>=2)
URLhttp://www.bdmg.com.ar/?page_id=38
Downloads rank508
Source branchRELEASE_3_23
biocViewsCancer, DifferentialExpression, ExperimentData, Microarray, OneChannel, Software, TwoChannel, Visualization

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packagelmdme_1.54.0.tar.gz
Windows binary (x86_64)lmdme_1.54.0.zip
macOS binary (arm64)lmdme_1.54.0.tgz
macOS binary (x86_64)lmdme_1.54.0.tgz
Dependencies

Depends: R (>= 2.14.1), pls, stemHypoxia

Imports: stats, methods, limma

Enhances: parallel